Сергушичев Алексей Александрович


кандидат технических наук
alserg@itmo.ru
Структурное подразделение:
научно-образовательный центр геномного разнообразия
Должность:
директор
Структурное подразделение:
факультет информационных технологий и программирования
Должность:
доцент
Профиль:
05.13.18 - Математическое моделирование, численные методы и комплексы программ

Область интересов:
Биоинформатика и системная биология. Методы анализа экспрессии генов и других биологических данных. Дискретная оптимизация на графах, задачи целочисленного линейного программирования.
Рабочий язык:
Английский, Русский

Публикации руководителя
Выходные данные Год Индексирование в БД
Zlotina A., Melnik O., Fomicheva Y., Skitchenko R.K., Sergushichev A., Shagimardanova E., Gusev O., Gazizova G., Loevets T., Vershinina T., Kozyrev I., Gordeev M., Vasichkina E., Pervunina T., Kostareva A.A. A 300-kb microduplication of 7q36.3 in a patient with triphalangeal thumb-polysyndactyly syndrome combined with congenital heart disease and optic disc coloboma: a case report//BMC Medical Genomics, 2020, Vol. 13, No. 1, pp. 175 2020 Scopus, Web of Science
Иванова О.А., Игнатьева Е.В., Лелявина Т.А., Галенко В.Л., Комарова М.Ю., Борцова М.А., Ситникова М.Ю., Костарева А.А., Сергушичев А.А., Дмитриева Р.И. Анализ транскриптома скелетной мускулатуры выявил влияние физических тренировок на молекулярные механизмы регуляции роста и метаболизма мышечной ткани у пациентов с хронической сердечной недостаточнстью // Российский кардиологический журнал [Russian Journal of Cardiology] -2020. - Т. 25. - № 10. - С. 79-86 2020 Scopus, ВАК, РИНЦ
Гайнуллина А.Н., Сухов В.Д., Шалыто А.А., Сергушичев А.А. Применение метода независимых компонент для определения начального приближения при поиске активных модулей в биологических графах [Independent component analysis for initial approximation determination in identification of active modules in biological graphs] // Научно-технический вестник информационных технологий, механики и оптики [Scientific and Technical Journal of Information Technologies, Mechanics and Optics] -2020. - Т. 20. - № 6(130). - С. 888-892 2020 Scopus, ВАК, РИНЦ
Гайнуллина А.Н., Артемов М., Сергушичев А.А. Модификация метода совместной кластеризации в графовом и корреляционном пространствах [Method of joint clustering in network and correlation spaces] // Научно-технический вестник информационных технологий, механики и оптики [Scientific and Technical Journal of Information Technologies, Mechanics and Optics] -2020. - Т. 20. - № 6(130). - С. 807-814 2020 Scopus, ВАК, РИНЦ
Aguilar S., Aguilar O., Allan R., Amir E., Angeli V., Artyomov M.N., Asinovski N., Astarita J., Austen K., Bajpai G., Barrett N., Baysoy A., Benoist C., Bellemare-Pelletier A., Berg B., Best A., Bezman N., Blair D., Blander J., Bogunovic M., Brennan P., Brenner M., Brown B., Buechler M., Buenrostro J., Casanova M., Choi K., Chow A., Chudnovskiy A., Cipoletta D., Cohen N., Collins J., Colonna M., Cook A., Costello J., Cremasco V., Crowl T., Crozat K., Cruse R., D’Angelo J., Dalod M., Davis S., Demiralp C., Deng T., Desai J., Desland F., Dhainaut M., Ding J., Doedens A., Dominguez C., Doran G., Dress R., Dustin M., Dwyer D., Dzhagalov I., Elpek K., Ergun A., Ericson J., Esomonu E., Fairfax K., Fletcher A., Frascoli M., Fuchs A., Gainullina A., Gal-Oz S., Gallagher M., Gautier E., Gazit R., Gibbings S., Giraud M., Ginhoux F., Goldrath A., Gotthardt D., Gray D., Greter M., Grieshaber-Bouyer R., Guilliams M., Haidermota S., Hardy R., Hashimoto D., Helft J., Hendricks D., Heng T., Hill J., Hyatt G., Idoyaga J., Jakubzick C., Jarjoura J., Jepson D., Jia B., Jianu R., Johanson T., Jordan S., Jojic V., Kamimura Y., Kana V., Kang J., Kapoor V., Kenigsberg E., Kent A., Kim C., Kim E., Kim F., Kim J., Kim K., Kiner E., Knell J., Koller D., Krchma K., Kozinn L., Kreslavsky T., Kronenberg M., Kwan W., Laidlaw D., Lam V., Lanier L., Laplace C., Lareau C., Lavin Y., Lavine K., Leader A., Leboeuf M., Lee J., Lee J., Li B., Li H., Li Y., Lionakis M., Luche H., Lynch L., Magen A., Maier B., Malhotra D., Malhotra N., Malissen M., Maslova A., Mathis D., Mcfarland A., Merad M., Meunier E., Miller J., Milner J., Mingueneau M., Min-Oo G., Monach P., Moodley D., Mortha A., Morvan M., Mostafavi S., Muller S., Muus C., Nabekura T., Nageswara Rao T., Narang V., Narayan K., Ner-Gaon H., Nguyen Q., Nigrovic P., Novakovsky G., Nutt S., Omilusik K., Ortiz-Lopez A., Paidassi H., Paik H., Painter M., Paynich M., Peng V., Potempa M., Pradhan R., Price J., Qi Y., Qi Y., Quon S., Ramirez R., Ramanan D., Randolph G., Regev A., Rhoads A., Robinette M., Rose S., Rossi D., Rothamel K., Sachidanandam R., Sathe P., Scott C., Seddu K., See P., Sergushichev A., Shaw L., Shay T., Shemesh A., Shinton S., Shyer J., Sieweke M., Smillie C., Spel L., Spidale N., Stifano G., Subramanian A., Sun J., Sylvia K., Tellier J., This S., Tomasello E., Todorov H., Turley S., Vijaykumar B., Wagers A., Wakamatsu E., Wang C., Wang P., Wroblewska A., Wu J., Yang E., Yang L., Yim A., Yng L., Yoshida H., Yu B., Zhou Y., Zhu Y., Ziemkiewicz C. ImmGen at 15//Nature Immunology, 2020, Vol. 21, No. 7, pp. 700-703 2020 Scopus, Web of Science
Vershinina T., Fomicheva Y., Muravyev A., Jorholt J., Kozyreva A., Kiselev A.M., Gordeev M., Vasichkina E., Sergushichev A., Pervunina T.М., Sjoberg G., Skyttner-Rahmani S., Sejersen T., Kostareva A.A. Genetic Spectrum of Left Ventricular Non-Compaction in Paediatric Patients//Cardiology, 2020, Vol. 145, No. 11, pp. 746-755 2020 Scopus, Web of Science
Perepelina K.I., Kostina A.S., Klauzen P., Khudiakov A., Rabino M., Crasto S., Zlotina A.M., Fomicheva Y., Sergushichev A.A., Oganesian M., Dmitriev A., Kostareva A.A., Di Pasquale E., Malashicheva A.B. Generation of two iPSC lines (FAMRCi007-A and FAMRCi007-B) from patient with Emery–Dreifuss muscular dystrophy and heart rhythm abnormalities carrying genetic variant LMNA p.Arg249Gln//Stem Cell Research, 2020, Vol. 47, pp. 101895 2020 Scopus, Web of Science
Alexeev N., Isomurodov J., Sukhov V., Korotkevich G., Sergushichev A. Markov chain Monte Carlo for active module identification problem//BMC bioinformatics, 2020, Vol. 21, No. 6, pp. 261 2020 Scopus, Web of Science
Ignatieva E.V., Ivanova O.A., Komarova M.Y., Khromova N.V., Polev D.E., Kostareva A.A., Sergushichev A.A., Dmitrieva R. Lmna mutations g232e and r482l cause dysregulation of skeletal muscle differentiation, bioenergetics, and metabolic gene expression profile//Genes, 2020, Vol. 11, No. 9, pp. 1057 2020 Scopus, Web of Science
Гайнуллина А.Н., Шалыто А.А., Сергушичев А.А. Метод совместной кластеризации в графовом и корреляционном пространствах // Моделирование и анализ информационных систем -2020. - Т. 27. - № 2. - С. 180-193 2020 ВАК, РИНЦ
Bambouskova M., Gorvel L., Lampropoulou V., Sergushichev A., Loginicheva E., Jovanovic M., Klechevsky E., Stewart K.M., Randolph G.J., Artyomov M.N. Electrophilic properties of itaconate regulating macrophage activation//Journal of Immunology, 2020, Vol. 204, No. 1(Suppl.), pp. 152.17 2020 Scopus, Web of Science
Perepelina K.I., Klauzen P., Khudiakov A., Zlotina A.M., Fomicheva Y., Rudenko D., Gordeev M., Sergushichev A.A., Malashicheva A.B., Kostareva A.A. Generation of two iPSC lines (FAMRCi006-A and FAMRCi006-B) from patient with dilated cardiomyopathy and Emery–Dreifuss muscular dystrophy associated with genetic variant LMNAp.Arg527Pro.//Stem Cell Research, 2020, Vol. 43, pp. 101714 2020 Scopus, Web of Science
Ivanova O.A., Ignatieva E.V., Lelyavina T.A., Galenko V.L., Kiselev A.M., Sitnikova M.Y., Kostareva A.A., Dmitrieva R.I., Sergushichev A. Transcriptome sequencing revealed the upregulation of pathways that control regeneration and calcium handling in skeletal muscles of heart failure patients undergoing exercise rehabilitation program//European Journal of Heart Failure, 2019, Vol. 21, No. S1, pp. 578-579 2019 Scopus, Web of Science
Lelyavina T., Galenko V.L., Ivanova O.A., Komarova M.Y., Ignatieva E.V., Bortsova M.A., Yukina G.Y., Khromova N.V., Sitnikova M.Y., Kostareva A.A., Sergushichev A., Dmitrieva R.I. Clinical Response to Personalized Exercise Therapy in Heart Failure Patients with Reduced Ejection Fraction Is Accompanied by Skeletal Muscle Histological Alterations//International Journal of Molecular Sciences, 2019, Vol. 20, No. 21, pp. 5514 2019 Scopus, Web of Science
Zlotina A., Kiselev A., Sergushichev A., Parmon E., Kostareva A.A. Synemin expression profile during tissue-specific differentiation of mesenchymal stromal cells confirms its possible involvement in heart-hand syndrome//European Journal of Human Genetics, 2019, Vol. 27, No. Suppl.1, pp. 1008-1009 2019 Scopus, Web of Science
Kiselev A., Vaz R., Knyazeva A., Sergushichev A.A., Dmitrieva R., Khudiakov A., Jorholt J., Smolina N.A., Sukhareva K., Fomicheva Y., Mikhaylov E.N., Mitrofanova L.B., Predeus A.V., Sjoberg G., Rudenko D., Sejersen T., Lindstrand A., Kostareva A.A. Truncating variant in MYOF gene is associated with limb-girdle type muscular dystrophy and cardiomyopathy//Frontiers in Genetics, 2019, Vol. 10, pp. 608 2019 Scopus, Web of Science
Pelgrom L.R., Patente T.A., Sergushichev A.A., Esaulova E., Otto F., Ozir-Fazalalikhan A., Van Der Zande H.J., Van Der Ham A.J., Van Der Stel S., Artyomov M.N., Everts B. LKB1 expressed in dendritic cells governs the development and expansion of thymus-derived regulatory T cells//Cell Research, 2019, Vol. 29, No. 5, pp. 406-419 2019 Scopus, Web of Science
Dmitrieva R.I., Lelyavina T.A., Komarova M.Y., Galenko V.L., Ivanova O.A., Tikanova P.A., Khromova N., Golovkin A.S., Bortsova M.A., Sergushichev A.A., Sitnikova M.Y., Kostareva A.A. Skeletal muscle resident progenitor cells coexpress mesenchymal and myogenic markers and are not affected by chronic heart failure-induced dysregulations//Stem Cells International, 2019, pp. 5690345 2019 Scopus, Web of Science
Иванова О.А., Игнатьева Е., Лелявина Т.А., Галенко В.Л., Комарова М.Ю., Ситникова М.Ю., Костарева А.А., Сергушичев А.А., Дмитриева Р.И. Исследование дифференциальной экспрессии и сигнальных путей в скелетной мускулатуре пациентов с ХСН после физической реабилитации // Гены и клетки [Genes and Cells] -2019. - Т. 14. - № Приложение. - С. 101 2019 ВАК, РИНЦ
Bambouskova M., Gorvel L., Lampropoulou V., Sergushichev A.A., Loginicheva E., Johnson K., Korenfeld D., Mathyer M.E., Kim H., Huang L.H., Duncan D., Bregman H., Keskin A., Santeford A., Apte R.S., Sehgal R., Johnson B., Amarasinghe G.K., Soares M.P., Satoh T., Akira S., Hai T., Strong C.D., Auclair K., Roddy T.P., Biller S.A., Jovanovic M., Klechevsky E., Stewart K.M., Randolph G.J., Artyomov M.N. Electrophilic properties of itaconate and derivatives regulate the I kappa B zeta-ATF3 inflammatory axis//Nature, 2018, Vol. 556, No. 7702, pp. 501-504 2018 Scopus, Web of Science
Howard N.C., Marin N.D., Ahmed M., Rosa B.A., Martin J., Bambouskova M., Sergushichev A.A., Loginicheva E., Kurepina N., Rangel-Moreno J., Chen L., Kreiswirth B.N., Klein R.S., Balada-Llasat J., Torrelles J.B., Amarasinghe G.K., Mitreva M., Artyomov M.N., Hsu F.F., Mathema B., Khader S.A. Erratum to: Mycobacterium tuberculosis carrying a rifampicin drug resistance mutation reprograms macrophage metabolism through cell wall lipid changes (Nature Microbiology, (2018), 3, 10, (1099-1108), 10.1038/s41564-018-0245-0)//Nature Microbiology, 2018, Vol. 3, No. 11, pp. 1327 2018 Scopus, Web of Science
Howard N.C., Marin N.D., Ahmed M., Rosa B.A., Martin J., Bambouskova M., Sergushichev A., Loginicheva E., Kurepina N., Rangel-Moreno J., Chen L., Kreiswirth B.N., Klein R.S., Balada-Llasat J., Torrelles J.B., Amarasinghe G.K., Mitreva M., Artyomov M.N., Hsu F.F., Mathema B., Khader S.A. Mycobacterium tuberculosis carrying a rifampicin drug resistance mutation reprograms macrophage metabolism through cell wall lipid changes//Nature Microbiology, 2018, Vol. 3, No. 10, pp. 1099-1108 2018 Scopus, Web of Science
Kiselev A., Vaz R., Knyazeva A., Khudiakov A., Tarnovskaya S., Liu J., Sergushichev A.A., Kazakov S.V., Frishman D., Smolina N.A., Pervunina T., Jorholt J., Sjoberg G., Vershinina T., Rudenko D., Arner A., Sejersen T., Lindstrand A., Kostareva A.A. De novo mutations in FLNC leading to early-onset restrictive cardiomyopathy and congenital myopathy//Human Mutation, 2018, Vol. 39, No. 9, pp. 1161-1172 2018 Scopus, Web of Science
Zlotina A., Kiselev A., Sergushichev A.A., Parmon E., Kostareva A.A. Rare case of ulnar-mammary-like syndrome with left ventricular tachycardia and lack of TBX3 mutation//Frontiers in Genetics, 2018, Vol. 9, pp. 209 2018 Scopus, Web of Science
Kostina A., Kiselev A., Bjorck H., Irtyuga O., Sergushichev A.A., Baranov Y., Eriksson P., Kostareva A., Malashicheva A. Notch signaling pathway is attenuated in aortic endothelial cells of patients with aortic pathologies associated with bicuspid aortic valve//Cardiovascular Research, 2018, Vol. 114, No. suppl.1, pp. S83 2018 Scopus, Web of Science
Kiselev A., Kornishina T., Sergushichev A., Smolina N., Klyushina A., Pervunina T., Bang M.L., Sjoberg G., Sejersen T., Kostareva A. New variant in CMYA5 gene is associated with early-onset restrictive cardiomyopathy and autism-spectrum disorder//Cardiovascular Research, 2018, Vol. 114, No. suppl.1, pp. S19 2018 Scopus, Web of Science
Ulland T.K., Song W., Huang S.C., Ulrich J.D., Sergushichev A.A., Beatty W.L., Loboda A.A., Zhou Y., Cairns N.J., Kambal A., Loginicheva E., Gilfillan S., Cella M., Virgin H.W., Unanue E.R., Wang Y., Artyomov M.N., Holtzman D.M., Colonna M. TREM2 Maintains Microglial Metabolic Fitness in Alzheimer's Disease//Cell, 2017, Vol. 170, No. 4, pp. 649-663.e13 2017 Scopus, Web of Science
Isomurodov J.E., Loboda A.A., Sergushichev A.A. Ranking Vertices for Active Module Recovery Problem//Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2017, Vol. 10252, pp. 75-84 2017 Scopus, Web of Science
Khudiakov A., Kostina D., Zlotina A., Nikulina T., Sergushichev A.A., Gudkova A., Tomilin A., Malashicheva A.B., Kostareva A.A. Generation of iPSC line from desmin-related cardiomyopathy patient carrying splice site mutation of DES gene//Stem Cell Research, 2017, Vol. 24, pp. 77-80 2017 Scopus, Web of Science
Khudiakov A., Kostina D., Zlotina A., Yany N., Sergushichev A.A., Pervunina T., Tomilin A., Kostareva A.A., Malashicheva A.B. Generation of iPSC line from patient with arrhythmogenic right ventricular cardiomyopathy carrying mutations in PKP2 gene//Stem Cell Research, 2017, Vol. 24, pp. 85-88 2017 Scopus, Web of Science
Lampropoulou V., Sergushichev A.A., Bambouskova M., Nair S., Vincent E.E., Loginicheva E., Cervantes-Barragan L., Ma X., Huang S., Griss T., Weinheimer C.J., Khader S.A., Randolph G.J., Pearce E.J., Jones R.G., Diwan A., Diamond M.S., Artyomov M.N. Itaconate Links Inhibition of Succinate Dehydrogenase with Macrophage Metabolic Remodeling and Regulation of Inflammation//Cell Metabolism, 2016, Vol. 24, No. 1, pp. 158–166 2016 Scopus, Web of Science
Sergushichev A.A., Loboda A.A., Jha A.K., Vincent E.E., Driggers E.M., Jones R.G., Pearce E.J., Artyomov M.N. GAM: a web-service for integrated transcriptional and metabolic network analysis//Nucleic Acids Research, 2016, Vol. 44, No. 1, pp. W194-W200 2016 Scopus, Web of Science
Loboda A.A., Artyomov M.N., Sergushichev A.A. Solving generalized maximum-weight connected subgraph problem for network enrichment analysis//Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2016, Vol. 9838, pp. 210-221 2016 Scopus, Web of Science
Artyomov M.N., Sergushichev A., Schilling J. Integrating immunometabolism and macrophage diversity//Seminars in Immunology, 2016, Vol. 28, No. 5, pp. 417-424 2016 Scopus, Web of Science
Izreig S., Samborska B., Johnson R.M., Sergushichev A., Ma E.H., Lussier C., Loginicheva E., Donayo A.O., Poffenberger M.C., Sagan S.M., Vincent E.E., Artyomov M.N., Duchaine T.F., Jones R.G. The miR-17 similar to 92 microRNA Cluster Is a Global Regulator of Tumor Metabolism//Cell Reports, 2016, Vol. 16, No. 7, pp. 1915-1928 2016 Scopus, Web of Science
Derr A.C., Yang C., Zilionis R., Sergushichev A.A., Blodgett D., Redick S., Bortell R., Luban J., Harlan В.M., Kadener S., Greiner D.L., Klein A., Artyomov M.N., Garber M. End Sequence Analysis Toolkit (ESAT) expands the extractable information from single-cell RNA-seq data//Genome Research, 2016, Vol. 26, No. 10, pp. 1397-1410 2016 Scopus, Web of Science
Lu Q., Yokoyama C.C., Williams J.W., Baldridge M.T., Jin X., Desrochers B., Bricker T., Wilen C.B., Bagaitkar J., Loginicheva E., Sergushichev A., Kreamalmeyer D., Keller B.C., Zhao Y., Kambal A., Green D.R., Martinez J., Dinauer M.C., Holtzman M.J., Crouch E.C., Beatty W., Boon A.C., Zhang H., Randolph G.J., Artyomov M.N., Virgin H.W. Homeostatic Control of Innate Lung Inflammation by Vici Syndrome Gene Epg5 and Additional Autophagy Genes Promotes Influenza Pathogenesis//Cell Host and Microbe, 2016, Vol. 19, No. 1, pp. 102-113 2016 Scopus, Web of Science
Glotov A.S., Kazakov S., Zhukova E.A., Alexandrov A., Glotov O.S., Pakin V.S., Danilova M.M., Poliakova I.V., Niyazova S.S., Chakova N.N., Komissarova S.M., Kurnikova E.A., Sarana A.M., Sherbak S.G., Sergushichev A., Shalyto A., Baranov V.S. Targeted next-generation sequencing (NGS) of nine candidate genes with custom AmpliSeq in patients and a cardiomyopathy risk group//Clinica Chimica Acta, 2015, Vol. 446, pp. 132-140 2015 Scopus, Web of Science
Jha A.K., Huang S.C., Sergushichev A.A., Lampropoulou V., Ivanova Y., Loginicheva E., Chmielewski K., Stewart K.M., Ashall J., Everts B., Pearce E.J., Driggers E.M., Artyomov M.N. Network integration of parallel metabolic and transcriptional data reveals metabolic modules that regulate macrophage polarization//Immunity, 2015, Vol. 42, No. 3, pp. 419-430 2015 Scopus, Web of Science
Vincent E.E., Sergushichev A.A., Griss T., Gingras M., Samborska B., Ntimbane T., Coelho P.P., Blagih J., Raissi T.C., Choiniere L., Bridon G., Loginicheva E., Flynn B.R., Thomas E.C., Tavare J.M., Avizonis D.Z., Pause A.P., Elder D.J., Artyomov M.N., Jones R.G. Mitochondrial Phosphoenolpyruvate Carboxykinase Regulates Metabolic Adaptation and Enables Glucose-Independent Tumor Growth//Molecular Cell, 2015, Vol. 60, No. 2, pp. 195-207 2015 Scopus, Web of Science
Сергушичев А.А., Александров А.В., Казаков С.В., Царев Ф.Н., Шалыто А.А. Совместное применение графа де Брейна, графа перекрытий и микросборки для de novo сборки генома // Известия Саратовского университета. Новая серия. Серия: Математика. Механика. Информатика -2013. - Т. 13. - № 2-2. - С. 51–57 2013 ВАК, РИНЦ
Bradnam K.R., Fass J.N., Alexandrov A., Baranay P., Bechner M., Birol I., Boisvert S., Chapman J.A., Chapuis G., Chikhi R., Chitsaz H., Chou W., Corbeil J., Del Fabbro C., Docking T.R., Durbin R., Earl D., Emrich S., Fedotov P., Fonseca N.A., Ganapathy G., Gibbs R.A., Gnerre S., Godzaridis E., Goldstein S., Haimel M., Hall G., Haussler D., Hiatt J.B., Ho I.Y., Howard J., Hunt M., Jackman S.D., Jaffe D.B., Jarvis E.D., Jiang H., Kersey P.J., Kazakov S., Kitzman J.O., Knight J.R., Koren S., Lam T., Lavenier D., Laviolette F., Li Z., Li Y., Liu B., Liu Y., Luo R., Maccallum I., Macmanes M.D., Maillet N., Melnikov S., Naquin D., Ning Z., Otto T.D., Paten B., Paulo O., Phillippy A.M., Pina-Martins F., Place M., Przybylski D., Qin X., Qu C., Ribeiro F.J., Richards S., Rokhsar D.S., Ruby J.G., Scalabrin S., Schatz M.C., Schwartz D.C., Sergushichev A., Sharpe T., Shaw T.I., Shendure J., Shi Y., Simpson J.T., Song H., Tsarev F., Vezzi F., Vicedomini R., Vieira B.M., Wang J., Worley K.C., Yin S., Yiu S., Yuan J., Zhang G., Zhang H., Zhou S., Korf I.F. Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species//GigaScience, 2013, Vol. 2, No. 1, pp. 10 2013 Scopus, Web of Science
Александров А.В., Казаков С.В., Сергушичев А.А., Царев Ф.Н., Шалыто А.А. Применение эволюционного программирования на основе обучающих примеров для генерации конечных автоматов, управляющих объектами со сложным поведением // Известия Российской академии наук. Теория и системы управления -2013. - № 3. - С. 85-100 2013 ВАК, РИНЦ
Aleksandrov A.V., Tsarev F.N., Kazakov S.V., Sergushichev A.A., Shalyto A.A. The use of evolutionary programming based on training examples for the generation of finite state machines for controlling objects with complex behavior//Journal of Computer and Systems Sciences International, 2013, Vol. 52, No. 3, pp. 410-425 2013 Scopus, Web of Science
Александров А.В., Казаков С.В., Мельников С.В., Сергушичев А.А., Царев Ф.Н. Метод сборки контигов геномных последовательностей на основе совместного применения графов Де Брюина и графов перекрытий // Научно-технический вестник информационных технологий, механики и оптики [Scientific and Technical Journal of Information Technologies, Mechanics and Optics] -2012. - № 6(82). - С. 93-98 2012 ВАК, РИНЦ
Aleksandrov A.V., Sergushichev A.A., Kazakov S.V., Tsarev F.N. Genetic algorithm for induction of finite automata with continuous and discrete output actions//Genetic and Evolutionary Computation Conference, GECCO'11 - Companion Publication, 2011, pp. 775-778 2011 Scopus